Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 COQ10BP2-201ENST00000513804 724 ntBASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC090136.2-201ENST00000517809 420 ntBASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC020658.7-201ENST00000624274 2442 ntBASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC020910.6-201ENST00000623084 1459 ntBASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 FAM86B3P-203ENST00000523992 854 ntBASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AC010632.2-201ENST00000588369 1224 ntBASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 AC004241.5-201ENST00000623870 2448 ntBASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHKBP1Q8TBC3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 AP000354.1-201ENST00000396982 456 ntBASIC14.53□□□□□ -0.08
SHKBP1Q8TBC3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms