Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AP000842.3-202ENST00000569238 1080 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC105021.1-202ENST00000570572 669 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC025048.3-201ENST00000590609 569 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 LINC01115-203ENST00000606068 577 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 IFNL4P1-201ENST00000607083 540 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC005702.4-201ENST00000618393 416 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC007608.4-201ENST00000623140 3365 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC012313.5-201ENST00000594816 2517 ntBASIC10.35□□□□□ -0.75
HIST1H2BDP58876 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
HIST1H2BDP58876 AC133065.6-201ENST00000625054 2378 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC073578.3-201ENST00000624926 4191 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 RN7SKP230-201ENST00000365642 335 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC002056.1-201ENST00000395613 760 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 METTL26-205ENST00000397666 726 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 HMGA1P1-201ENST00000415560 1062 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 SRP19-206ENST00000515463 660 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC022616.1-201ENST00000518688 554 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 CLEC4GP1-201ENST00000596555 870 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC002472.3-201ENST00000640124 621 ntBASIC10.34□□□□□ -0.75
HIST1H2BDP58876 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 USP20-203ENST00000372429 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC10.34□□□□□ -0.75
HIST1H2BDP58876 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms