Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 MIR4459-201ENST00000581837 66 ntBASIC23.66■■□□□ 1.38
SMARCA4P51532 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC23.66■■□□□ 1.38
SMARCA4P51532 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCA4P51532 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 AL356583.1-201ENST00000398739 1371 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC012531.1-201ENST00000562848 2680 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 DDX6P2-201ENST00000619520 1455 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SMARCA4P51532 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SMARCA4P51532 AL356583.3-201ENST00000412354 417 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC23.65■■□□□ 1.38
SMARCA4P51532 C2orf27AP2-201ENST00000438438 555 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 HNRNPA1P30-202ENST00000440699 997 ntBASIC23.65■■□□□ 1.38
SMARCA4P51532 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC23.65■■□□□ 1.38
SMARCA4P51532 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCA4P51532 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SMARCA4P51532 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 HRC-203ENST00000595625 2044 ntTSL 5 BASIC23.64■■□□□ 1.38
SMARCA4P51532 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC23.64■■□□□ 1.38
SMARCA4P51532 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC23.64■■□□□ 1.38
SMARCA4P51532 EGLN3-205ENST00000547327 2849 ntBASIC23.64■■□□□ 1.38
SMARCA4P51532 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 HLA-DQB3-203ENST00000425319 356 ntBASIC23.64■■□□□ 1.38
SMARCA4P51532 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCA4P51532 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC23.64■■□□□ 1.38
SMARCA4P51532 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC23.64■■□□□ 1.38
SMARCA4P51532 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC23.64■■□□□ 1.37
SMARCA4P51532 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCA4P51532 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCA4P51532 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCA4P51532 AGAP10P-201ENST00000454844 2418 ntBASIC23.64■■□□□ 1.37
SMARCA4P51532 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
SMARCA4P51532 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCA4P51532 AC025538.1-201ENST00000510707 1486 ntBASIC23.64■■□□□ 1.37
SMARCA4P51532 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 C1orf158-201ENST00000376210 695 ntTSL 3 BASIC23.63■■□□□ 1.37
SMARCA4P51532 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC23.63■■□□□ 1.37
SMARCA4P51532 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC23.63■■□□□ 1.37
SMARCA4P51532 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCA4P51532 AC111170.3-201ENST00000624282 2464 ntBASIC23.63■■□□□ 1.37
SMARCA4P51532 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC23.63■■□□□ 1.37
SMARCA4P51532 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SMARCA4P51532 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCA4P51532 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
SMARCA4P51532 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCA4P51532 MRPS16P3-201ENST00000415961 374 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 AL078621.2-201ENST00000419351 698 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 MTND6P7-201ENST00000433237 524 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 RN7SL340P-201ENST00000470792 296 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 AC253536.5-201ENST00000506097 347 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCA4P51532 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCA4P51532 AC106774.4-201ENST00000600799 409 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC23.62■■□□□ 1.37
SMARCA4P51532 AL591926.3-201ENST00000611630 238 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 AC010503.4-201ENST00000615487 688 ntBASIC23.62■■□□□ 1.37
SMARCA4P51532 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCA4P51532 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SMARCA4P51532 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms