Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RAD52-212ENST00000541619 560 ntTSL 4 BASIC17.52■□□□□ 0.4
RXRBP28702 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC17.52■□□□□ 0.4
RXRBP28702 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC17.52■□□□□ 0.4
RXRBP28702 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC17.52■□□□□ 0.4
RXRBP28702 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC17.52■□□□□ 0.4
RXRBP28702 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC17.52■□□□□ 0.4
RXRBP28702 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC17.52■□□□□ 0.4
RXRBP28702 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.52■□□□□ 0.4
RXRBP28702 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.52■□□□□ 0.39
RXRBP28702 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.52■□□□□ 0.39
RXRBP28702 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.52■□□□□ 0.39
RXRBP28702 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.52■□□□□ 0.39
RXRBP28702 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RXRBP28702 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
RXRBP28702 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RXRBP28702 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RXRBP28702 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RXRBP28702 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 SUCLG2P2-201ENST00000307241 1296 ntBASIC17.51■□□□□ 0.39
RXRBP28702 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RXRBP28702 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RXRBP28702 TRBV22-1-201ENST00000424543 337 ntBASIC17.51■□□□□ 0.39
RXRBP28702 AC009237.11-201ENST00000425635 265 ntBASIC17.51■□□□□ 0.39
RXRBP28702 PGAM1P2-201ENST00000436071 725 ntBASIC17.51■□□□□ 0.39
RXRBP28702 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 AL929472.4-201ENST00000447422 691 ntBASIC17.51■□□□□ 0.39
RXRBP28702 AC018892.1-201ENST00000451098 265 ntBASIC17.51■□□□□ 0.39
RXRBP28702 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.51■□□□□ 0.39
RXRBP28702 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC17.51■□□□□ 0.39
RXRBP28702 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC17.51■□□□□ 0.39
RXRBP28702 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC17.51■□□□□ 0.39
RXRBP28702 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 MEG8_2.1-201ENST00000610604 122 ntBASIC17.51■□□□□ 0.39
RXRBP28702 MYO5BP1-201ENST00000610994 1239 ntBASIC17.51■□□□□ 0.39
RXRBP28702 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC17.51■□□□□ 0.39
RXRBP28702 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RXRBP28702 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.51■□□□□ 0.39
RXRBP28702 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RXRBP28702 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RXRBP28702 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.5■□□□□ 0.39
RXRBP28702 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 ZSCAN5DP-201ENST00000600684 1488 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC17.5■□□□□ 0.39
RXRBP28702 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 AC018529.2-202ENST00000611482 3087 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.5■□□□□ 0.39
RXRBP28702 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RXRBP28702 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 RN7SKP170-201ENST00000362550 328 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC17.5■□□□□ 0.39
RXRBP28702 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RXRBP28702 AC253536.2-201ENST00000423307 254 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AL355309.1-201ENST00000442158 78 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC17.5■□□□□ 0.39
RXRBP28702 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RXRBP28702 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC17.5■□□□□ 0.39
RXRBP28702 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC17.5■□□□□ 0.39
RXRBP28702 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC17.5■□□□□ 0.39
RXRBP28702 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC239859.5-201ENST00000614100 1232 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AC012313.9-201ENST00000619318 633 ntBASIC17.5■□□□□ 0.39
RXRBP28702 AL365203.3-201ENST00000609742 2057 ntBASIC17.5■□□□□ 0.39
RXRBP28702 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms