Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 AL358781.1-202ENST00000321081 1360 ntBASIC12.39□□□□□ -0.43
APOC1P02654 FAM90A7P-201ENST00000382628 1395 ntBASIC12.39□□□□□ -0.43
APOC1P02654 FAM90A23P-201ENST00000400136 1395 ntBASIC12.39□□□□□ -0.43
APOC1P02654 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 AC004899.1-201ENST00000424687 1714 ntBASIC12.39□□□□□ -0.43
APOC1P02654 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOC1P02654 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOC1P02654 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 AC011742.3-201ENST00000439053 820 ntBASIC12.38□□□□□ -0.43
APOC1P02654 VDAC1P1-201ENST00000439229 848 ntBASIC12.38□□□□□ -0.43
APOC1P02654 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 AC007663.3-201ENST00000609632 465 ntBASIC12.38□□□□□ -0.43
APOC1P02654 AC004923.1-202ENST00000642106 209 ntBASIC12.38□□□□□ -0.43
APOC1P02654 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOC1P02654 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.38□□□□□ -0.43
APOC1P02654 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOC1P02654 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 LINC00115-201ENST00000473798 1317 ntBASIC12.37□□□□□ -0.43
APOC1P02654 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.37□□□□□ -0.43
APOC1P02654 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOC1P02654 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms