Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
APOA1P02647 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.42□□□□□ -0.42
APOA1P02647 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.42□□□□□ -0.42
APOA1P02647 GNAQP1-201ENST00000444815 1067 ntBASIC12.42□□□□□ -0.42
APOA1P02647 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.42□□□□□ -0.42
APOA1P02647 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.42□□□□□ -0.42
APOA1P02647 PGAM5P1-201ENST00000518923 814 ntBASIC12.42□□□□□ -0.42
APOA1P02647 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 AC120045.2-201ENST00000567334 178 ntBASIC12.42□□□□□ -0.42
APOA1P02647 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
APOA1P02647 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.42□□□□□ -0.42
APOA1P02647 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
APOA1P02647 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOA1P02647 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
APOA1P02647 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 ACTBP8-201ENST00000403258 1108 ntBASIC12.41□□□□□ -0.42
APOA1P02647 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.41□□□□□ -0.42
APOA1P02647 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.41□□□□□ -0.42
APOA1P02647 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.41□□□□□ -0.42
APOA1P02647 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 MIR4469-201ENST00000583919 79 ntBASIC12.41□□□□□ -0.42
APOA1P02647 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 BRI3BPP1-201ENST00000594224 787 ntBASIC12.41□□□□□ -0.42
APOA1P02647 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.41□□□□□ -0.42
APOA1P02647 INTS4P2-202ENST00000614726 2019 ntBASIC12.41□□□□□ -0.42
APOA1P02647 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
APOA1P02647 SALL4P6-201ENST00000429385 1691 ntBASIC12.41□□□□□ -0.42
APOA1P02647 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOA1P02647 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.41□□□□□ -0.42
APOA1P02647 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms