Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AL805961.2-201ENST00000642139 4817 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AL355334.1-201ENST00000417713 215 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC114501.1-201ENST00000445949 172 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 GRPEL2P1-201ENST00000453145 339 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 SLC25A15P3-201ENST00000505530 290 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC068867.1-201ENST00000559855 150 ntBASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPA3F8WFD2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 RPL13AP3-202ENST00000494676 1473 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 BAK1P1-201ENST00000317045 636 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 RN7SL564P-201ENST00000496309 250 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 AL139158.3-201ENST00000641212 1562 ntBASIC12.68□□□□□ -0.38
NPIPA3F8WFD2 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms