Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AL132656.1-201ENST00000452173 490 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 ERH-202ENST00000555373 586 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SNORD55-201ENST00000581525 80 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC117500.5-201ENST00000623233 527 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 RCC2P5-201ENST00000492126 1487 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC020658.6-201ENST00000623564 1870 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC008038.1-201ENST00000634247 1314 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AL355309.1-201ENST00000442158 78 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC104117.1-201ENST00000517817 900 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MIR3194-201ENST00000582236 73 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC011498.7-201ENST00000624986 2027 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 C19orf38-201ENST00000397820 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 GAPDHP1-201ENST00000452570 1005 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC091893.1-201ENST00000503772 399 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 IGLCOR22-1-201ENST00000523725 316 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MYO5BP1-201ENST00000610994 1239 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CHD8Q9HCK8 AC018442.1-201ENST00000421439 2061 ntBASIC12.47□□□□□ -0.41
CHD8Q9HCK8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PFN1P3-201ENST00000443612 402 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PFN1P4-201ENST00000450970 402 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 RN7SL105P-201ENST00000475661 299 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 RPLP0P2-204ENST00000490750 961 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AC073592.1-201ENST00000543970 1282 ntTSL 3 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AC116553.1-201ENST00000561752 397 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AC025165.4-201ENST00000602327 433 ntBASIC12.46□□□□□ -0.41
CHD8Q9HCK8 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHD8Q9HCK8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms