Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 AC114947.1-202ENST00000514136 344 ntBASIC14.35□□□□□ -0.11
HDAC11Q96DB2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 KRT18P9-201ENST00000604826 1300 ntBASIC14.35□□□□□ -0.11
HDAC11Q96DB2 CR383656.2-201ENST00000548656 2254 ntBASIC14.35□□□□□ -0.11
HDAC11Q96DB2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 MARK2P16-201ENST00000605714 1723 ntBASIC14.35□□□□□ -0.11
HDAC11Q96DB2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HDAC11Q96DB2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 LINC00265-2P-201ENST00000413372 782 ntBASIC14.34□□□□□ -0.11
HDAC11Q96DB2 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 MIR4754-201ENST00000582477 89 ntBASIC14.34□□□□□ -0.11
HDAC11Q96DB2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HDAC11Q96DB2 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HDAC11Q96DB2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.33□□□□□ -0.11
HDAC11Q96DB2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HDAC11Q96DB2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.33□□□□□ -0.11
HDAC11Q96DB2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.33□□□□□ -0.11
HDAC11Q96DB2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 AC108024.1-201ENST00000626286 1721 ntBASIC14.33□□□□□ -0.12
HDAC11Q96DB2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 Z98885.3-201ENST00000624882 1757 ntBASIC14.33□□□□□ -0.12
HDAC11Q96DB2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 AL353637.1-201ENST00000451571 732 ntBASIC14.33□□□□□ -0.12
HDAC11Q96DB2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.33□□□□□ -0.12
HDAC11Q96DB2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms