Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 PTP4A1P2-201ENST00000546033 454 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AL136370.1-201ENST00000608166 691 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 AC145423.3-201ENST00000615987 467 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 MRPL37P1-201ENST00000592451 1337 ntBASIC13.6□□□□□ -0.23
RNF217Q8TC41 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
RNF217Q8TC41 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNF217Q8TC41 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 LINC01159-201ENST00000433433 3103 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AL021155.1-201ENST00000438808 2637 ntBASIC13.59□□□□□ -0.23
RNF217Q8TC41 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AL391001.1-201ENST00000602747 715 ntBASIC13.59□□□□□ -0.23
RNF217Q8TC41 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 TUBGCP2-201ENST00000252936 3885 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 AC020910.5-201ENST00000623668 1865 ntBASIC13.59□□□□□ -0.23
RNF217Q8TC41 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC13.59□□□□□ -0.23
RNF217Q8TC41 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNF217Q8TC41 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.58□□□□□ -0.23
RNF217Q8TC41 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNF217Q8TC41 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.58□□□□□ -0.23
RNF217Q8TC41 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNF217Q8TC41 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNF217Q8TC41 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 AC023794.5-201ENST00000564380 2157 ntBASIC13.58□□□□□ -0.24
RNF217Q8TC41 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.58□□□□□ -0.24
RNF217Q8TC41 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RNF217Q8TC41 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNF217Q8TC41 RHD-210ENST00000622561 3007 ntTSL 5 BASIC13.58□□□□□ -0.24
RNF217Q8TC41 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms