Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 AL161932.2-201ENST00000435436 679 ntBASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 AC003958.1-201ENST00000435883 421 ntBASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 OR2I1P-208ENST00000641137 4948 ntBASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CFAP61Q8NHU2 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC064801.2-201ENST00000625052 1303 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 CYP4F23P-201ENST00000593402 1579 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 LINC00567-201ENST00000569854 3409 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC006122.1-201ENST00000493323 440 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 RN7SL163P-201ENST00000583100 276 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 BNIP3P13-201ENST00000599968 566 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC243960.2-201ENST00000600996 747 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AL022328.3-201ENST00000607943 679 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC133540.1-201ENST00000620845 1019 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AL008638.5-201ENST00000623814 1298 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 AC004923.1-202ENST00000642106 209 ntBASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CFAP61Q8NHU2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms