Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 HNRNPA1P59-201ENST00000430583 918 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 P2RX6P-202ENST00000450626 357 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AL606834.1-201ENST00000553836 1169 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PEBP1P1-201ENST00000554856 510 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC091691.1-201ENST00000583587 1018 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 Z93930.2-203ENST00000585003 516 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SARS2-211ENST00000598831 665 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC021683.4-201ENST00000623348 1099 ntBASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
VPS13DQ5THJ4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 RPS6-201ENST00000315377 863 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 RN7SL483P-201ENST00000478417 285 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 RN7SL363P-201ENST00000482412 273 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 FAM90A12P-201ENST00000519497 2375 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 FAM90A24P-201ENST00000520792 2369 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC103810.4-201ENST00000578601 257 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC002511.3-201ENST00000638098 420 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 LINC02381-202ENST00000635070 1341 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC023908.3-201ENST00000564211 3047 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 ZDHHC8P1-202ENST00000418264 1403 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC245369.8-201ENST00000636589 306 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 SYT17-204ENST00000562711 1702 ntAPPRIS ALT1 TSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 IDH3A-207ENST00000558554 1595 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 AC012146.4-201ENST00000575546 271 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 MIR4309-201ENST00000582498 83 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 RN7SL341P-201ENST00000613745 298 ntBASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC8.87□□□□□ -0.99
VPS13DQ5THJ4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 FAM90A27P-201ENST00000593323 1370 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 FAM90A28P-202ENST00000597191 1374 ntBASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
VPS13DQ5THJ4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms