Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 AC135782.3-201ENST00000562782 2105 ntBASIC13.94□□□□□ -0.18
AP1S1P61966 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
AP1S1P61966 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S1P61966 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 ACTBP14-201ENST00000411655 1089 ntBASIC13.94□□□□□ -0.18
AP1S1P61966 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S1P61966 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S1P61966 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S1P61966 AC005041.3-201ENST00000606287 649 ntBASIC13.94□□□□□ -0.18
AP1S1P61966 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.94□□□□□ -0.18
AP1S1P61966 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 AC126335.2-201ENST00000623362 4637 ntBASIC13.94□□□□□ -0.18
AP1S1P61966 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.94□□□□□ -0.18
AP1S1P61966 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP1S1P61966 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP1S1P61966 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP1S1P61966 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 PEG13-201ENST00000631594 5667 ntBASIC13.93□□□□□ -0.18
AP1S1P61966 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.93□□□□□ -0.18
AP1S1P61966 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 AC108024.1-201ENST00000626286 1721 ntBASIC13.93□□□□□ -0.18
AP1S1P61966 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 ABCD1P4-201ENST00000399687 604 ntBASIC13.93□□□□□ -0.18
AP1S1P61966 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AP1S1P61966 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S1P61966 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.93□□□□□ -0.18
AP1S1P61966 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP1S1P61966 EEF1GP8-201ENST00000506566 1154 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms