Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.02□□□□□ -0.48
ACTBP60709 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
ACTBP60709 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ACTBP60709 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 HSPA8P9-201ENST00000485881 1943 ntBASIC12.02□□□□□ -0.49
ACTBP60709 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ACTBP60709 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.02□□□□□ -0.49
ACTBP60709 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.02□□□□□ -0.49
ACTBP60709 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.02□□□□□ -0.49
ACTBP60709 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.02□□□□□ -0.49
ACTBP60709 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
ACTBP60709 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.02□□□□□ -0.49
ACTBP60709 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.02□□□□□ -0.49
ACTBP60709 AC005225.4-201ENST00000557330 545 ntBASIC12.02□□□□□ -0.49
ACTBP60709 AC106820.3-201ENST00000561653 397 ntBASIC12.02□□□□□ -0.49
ACTBP60709 AC025279.2-201ENST00000569730 653 ntBASIC12.02□□□□□ -0.49
ACTBP60709 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 AC012645.4-201ENST00000610691 1061 ntBASIC12.02□□□□□ -0.49
ACTBP60709 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ACTBP60709 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.02□□□□□ -0.49
ACTBP60709 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 LINC00638-201ENST00000555578 2518 ntBASIC12.02□□□□□ -0.49
ACTBP60709 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.02□□□□□ -0.49
ACTBP60709 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
ACTBP60709 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ACTBP60709 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 REXO1L6P-201ENST00000603433 1515 ntBASIC12.01□□□□□ -0.49
ACTBP60709 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
ACTBP60709 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 CCT8L1P-201ENST00000465400 1674 ntBASIC12.01□□□□□ -0.49
ACTBP60709 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.01□□□□□ -0.49
ACTBP60709 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 KRT43P-201ENST00000434019 910 ntBASIC12.01□□□□□ -0.49
ACTBP60709 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.01□□□□□ -0.49
ACTBP60709 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ACTBP60709 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.01□□□□□ -0.49
ACTBP60709 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.01□□□□□ -0.49
ACTBP60709 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.01□□□□□ -0.49
ACTBP60709 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.01□□□□□ -0.49
ACTBP60709 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.01□□□□□ -0.49
ACTBP60709 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms