Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 NCLP1-201ENST00000445357 1963 ntBASIC15.28■□□□□ 0.04
GPC3P51654 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GPC3P51654 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GPC3P51654 DKKL1P1-201ENST00000400550 698 ntBASIC15.28■□□□□ 0.04
GPC3P51654 GCSHP3-201ENST00000431120 391 ntBASIC15.28■□□□□ 0.04
GPC3P51654 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.28■□□□□ 0.04
GPC3P51654 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
GPC3P51654 AC013553.1-201ENST00000560906 267 ntBASIC15.28■□□□□ 0.04
GPC3P51654 TRMT112P3-201ENST00000580149 358 ntBASIC15.28■□□□□ 0.04
GPC3P51654 MIR4326-201ENST00000582203 59 ntBASIC15.28■□□□□ 0.04
GPC3P51654 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 AC006158.1-201ENST00000610661 249 ntBASIC15.28■□□□□ 0.04
GPC3P51654 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
GPC3P51654 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.28■□□□□ 0.04
GPC3P51654 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GPC3P51654 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 AL365181.1-201ENST00000564032 1828 ntBASIC15.27■□□□□ 0.04
GPC3P51654 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC3P51654 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GPC3P51654 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GPC3P51654 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GPC3P51654 BCAS2P2-201ENST00000425064 674 ntBASIC15.27■□□□□ 0.04
GPC3P51654 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC3P51654 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC3P51654 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.27■□□□□ 0.04
GPC3P51654 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.27■□□□□ 0.04
GPC3P51654 RN7SL396P-201ENST00000471086 295 ntBASIC15.27■□□□□ 0.04
GPC3P51654 AL157792.1-201ENST00000488281 530 ntBASIC15.27■□□□□ 0.04
GPC3P51654 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 COQ4-204ENST00000608951 781 ntTSL 2 BASIC15.27■□□□□ 0.04
GPC3P51654 AC010976.2-201ENST00000609697 852 ntBASIC15.27■□□□□ 0.04
GPC3P51654 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.27■□□□□ 0.03
GPC3P51654 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GPC3P51654 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 FMO6P-201ENST00000236166 1620 ntBASIC15.27■□□□□ 0.03
GPC3P51654 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GPC3P51654 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GPC3P51654 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.27■□□□□ 0.03
GPC3P51654 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
GPC3P51654 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.27■□□□□ 0.03
GPC3P51654 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GPC3P51654 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC3P51654 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.26■□□□□ 0.03
GPC3P51654 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GPC3P51654 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.26■□□□□ 0.03
GPC3P51654 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms