Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 AC087164.2-201ENST00000624514 3130 ntBASIC13.2□□□□□ -0.3
CLK1P49759 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 AGAP12P-201ENST00000585227 2359 ntBASIC13.2□□□□□ -0.3
CLK1P49759 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLK1P49759 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLK1P49759 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CLK1P49759 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLK1P49759 BTBD6P1-201ENST00000412176 1267 ntBASIC13.19□□□□□ -0.3
CLK1P49759 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.19□□□□□ -0.3
CLK1P49759 AC136604.1-202ENST00000425471 771 ntBASIC13.19□□□□□ -0.3
CLK1P49759 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 AL157407.1-201ENST00000435784 904 ntBASIC13.19□□□□□ -0.3
CLK1P49759 MTX1P1-201ENST00000440904 838 ntBASIC13.19□□□□□ -0.3
CLK1P49759 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.19□□□□□ -0.3
CLK1P49759 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.19□□□□□ -0.3
CLK1P49759 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.19□□□□□ -0.3
CLK1P49759 TUBB8P8-201ENST00000458717 1058 ntBASIC13.19□□□□□ -0.3
CLK1P49759 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 AL583810.1-201ENST00000553344 1045 ntBASIC13.19□□□□□ -0.3
CLK1P49759 RN7SL560P-201ENST00000577943 264 ntBASIC13.19□□□□□ -0.3
CLK1P49759 MIR4741-201ENST00000579822 90 ntBASIC13.19□□□□□ -0.3
CLK1P49759 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.19□□□□□ -0.3
CLK1P49759 MIR6720-201ENST00000611664 98 ntBASIC13.19□□□□□ -0.3
CLK1P49759 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.19□□□□□ -0.3
CLK1P49759 AL031719.1-201ENST00000623365 2587 ntBASIC13.19□□□□□ -0.3
CLK1P49759 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLK1P49759 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLK1P49759 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLK1P49759 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.18□□□□□ -0.3
CLK1P49759 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 TUBB8P4-201ENST00000511806 1324 ntBASIC13.18□□□□□ -0.3
CLK1P49759 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLK1P49759 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLK1P49759 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms