Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL023803.2-201ENST00000620080 638 ntBASIC14.93□□□□□ -0.02
SSR1P43307 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.93□□□□□ -0.02
SSR1P43307 AGAP12P-201ENST00000585227 2359 ntBASIC14.93□□□□□ -0.02
SSR1P43307 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.93□□□□□ -0.02
SSR1P43307 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 PCDHA6-201ENST00000378126 3267 ntBASIC14.93□□□□□ -0.02
SSR1P43307 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSR1P43307 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC14.93□□□□□ -0.02
SSR1P43307 AL357140.3-201ENST00000639753 1983 ntBASIC14.93□□□□□ -0.02
SSR1P43307 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 AC027020.2-201ENST00000602585 2389 ntBASIC14.92□□□□□ -0.02
SSR1P43307 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SSR1P43307 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.92□□□□□ -0.02
SSR1P43307 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.92□□□□□ -0.02
SSR1P43307 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 AC007663.3-201ENST00000609632 465 ntBASIC14.92□□□□□ -0.02
SSR1P43307 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.92□□□□□ -0.02
SSR1P43307 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSR1P43307 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.92□□□□□ -0.02
SSR1P43307 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSR1P43307 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
SSR1P43307 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSR1P43307 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 LINC00567-201ENST00000569854 3409 ntBASIC14.91□□□□□ -0.02
SSR1P43307 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SSR1P43307 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SSR1P43307 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR1P43307 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SSR1P43307 RNA5SP412-201ENST00000516234 123 ntBASIC14.91□□□□□ -0.02
SSR1P43307 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.91□□□□□ -0.02
SSR1P43307 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.91□□□□□ -0.02
SSR1P43307 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.91□□□□□ -0.02
SSR1P43307 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 AC104982.3-201ENST00000581995 514 ntBASIC14.91□□□□□ -0.02
SSR1P43307 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.91□□□□□ -0.02
SSR1P43307 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSR1P43307 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.91□□□□□ -0.02
SSR1P43307 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.9□□□□□ -0.02
SSR1P43307 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSR1P43307 RCC2P1-201ENST00000452257 1476 ntBASIC14.9□□□□□ -0.02
SSR1P43307 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSR1P43307 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms