Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USP8P40818 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.27■□□□□ 0.03
USP8P40818 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USP8P40818 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.27■□□□□ 0.03
USP8P40818 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP8P40818 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
USP8P40818 AC061965.1-201ENST00000560524 1465 ntBASIC15.27■□□□□ 0.03
USP8P40818 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.27■□□□□ 0.03
USP8P40818 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 MIR1908-201ENST00000410394 80 ntBASIC15.26■□□□□ 0.03
USP8P40818 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 AK2P2-201ENST00000439142 405 ntBASIC15.26■□□□□ 0.03
USP8P40818 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.26■□□□□ 0.03
USP8P40818 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.26■□□□□ 0.03
USP8P40818 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.26■□□□□ 0.03
USP8P40818 AL157813.1-201ENST00000612996 587 ntBASIC15.26■□□□□ 0.03
USP8P40818 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
USP8P40818 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
USP8P40818 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP8P40818 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
USP8P40818 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.25■□□□□ 0.03
USP8P40818 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.25■□□□□ 0.03
USP8P40818 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
USP8P40818 TSPY25P-201ENST00000429463 745 ntBASIC15.25■□□□□ 0.03
USP8P40818 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.25■□□□□ 0.03
USP8P40818 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.25■□□□□ 0.03
USP8P40818 NKAIN1P1-201ENST00000435754 582 ntBASIC15.25■□□□□ 0.03
USP8P40818 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.25■□□□□ 0.03
USP8P40818 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.25■□□□□ 0.03
USP8P40818 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms