Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RXRBP28702 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RXRBP28702 DBET-201ENST00000630918 3363 ntBASIC17.54■□□□□ 0.4
RXRBP28702 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 AC007312.1-201ENST00000427493 258 ntBASIC17.54■□□□□ 0.4
RXRBP28702 MED15P7-201ENST00000435410 822 ntBASIC17.54■□□□□ 0.4
RXRBP28702 AKIRIN1P2-201ENST00000440655 570 ntBASIC17.54■□□□□ 0.4
RXRBP28702 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 OR7E126P-201ENST00000526217 888 ntBASIC17.54■□□□□ 0.4
RXRBP28702 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.54■□□□□ 0.4
RXRBP28702 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 AL357137.1-201ENST00000604645 203 ntBASIC17.54■□□□□ 0.4
RXRBP28702 AP000553.2-201ENST00000609038 441 ntBASIC17.54■□□□□ 0.4
RXRBP28702 AC080038.2-201ENST00000617734 423 ntBASIC17.54■□□□□ 0.4
RXRBP28702 AC092471.2-201ENST00000637219 651 ntBASIC17.54■□□□□ 0.4
RXRBP28702 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 AC093462.1-201ENST00000621167 1683 ntBASIC17.54■□□□□ 0.4
RXRBP28702 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RXRBP28702 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 AL513497.1-201ENST00000624273 2083 ntBASIC17.54■□□□□ 0.4
RXRBP28702 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.54■□□□□ 0.4
RXRBP28702 AL157832.2-205ENST00000597245 1649 ntBASIC17.54■□□□□ 0.4
RXRBP28702 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RXRBP28702 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 AF013593.1-201ENST00000458074 1487 ntBASIC17.53■□□□□ 0.4
RXRBP28702 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 OR2A5-201ENST00000408906 1013 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RXRBP28702 RBM14-203ENST00000409372 876 ntTSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC17.53■□□□□ 0.4
RXRBP28702 CTSLP1-201ENST00000457530 1002 ntBASIC17.53■□□□□ 0.4
RXRBP28702 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 AC011773.4-202ENST00000566000 1264 ntBASIC17.53■□□□□ 0.4
RXRBP28702 AC127537.3-201ENST00000566532 749 ntBASIC17.53■□□□□ 0.4
RXRBP28702 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC17.53■□□□□ 0.4
RXRBP28702 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC17.53■□□□□ 0.4
RXRBP28702 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RXRBP28702 NOP16-210ENST00000619979 963 ntTSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 AC024580.2-201ENST00000623363 231 ntBASIC17.53■□□□□ 0.4
RXRBP28702 HIST1H2APS4-202ENST00000635537 681 ntBASIC17.53■□□□□ 0.4
RXRBP28702 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RXRBP28702 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.53■□□□□ 0.4
RXRBP28702 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RXRBP28702 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RXRBP28702 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RXRBP28702 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 HP-203ENST00000357763 1482 ntTSL 5 BASIC17.52■□□□□ 0.4
RXRBP28702 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RXRBP28702 TMX3-202ENST00000443099 913 ntTSL 2 BASIC17.52■□□□□ 0.4
RXRBP28702 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC17.52■□□□□ 0.4
RXRBP28702 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
RXRBP28702 OR52P2P-201ENST00000527287 955 ntBASIC17.52■□□□□ 0.4
RXRBP28702 EEF1DP8-201ENST00000534760 536 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms