Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
O00370 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.84□□□□□ -0.03
O00370 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
O00370 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
O00370 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
O00370 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
O00370 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
O00370 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.84□□□□□ -0.03
O00370 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
O00370 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
O00370 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
O00370 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
O00370 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
O00370 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
O00370 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.83□□□□□ -0.03
O00370 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
O00370 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.83□□□□□ -0.04
O00370 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.83□□□□□ -0.04
O00370 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
O00370 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.83□□□□□ -0.04
O00370 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.83□□□□□ -0.04
O00370 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.83□□□□□ -0.04
O00370 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.83□□□□□ -0.04
O00370 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.83□□□□□ -0.04
O00370 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.83□□□□□ -0.04
O00370 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.83□□□□□ -0.04
O00370 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.83□□□□□ -0.04
O00370 MIR3907-201ENST00000579424 151 ntBASIC14.83□□□□□ -0.04
O00370 MIR4522-201ENST00000584932 87 ntBASIC14.83□□□□□ -0.04
O00370 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.83□□□□□ -0.04
O00370 SIGLEC22P-201ENST00000599104 714 ntBASIC14.83□□□□□ -0.04
O00370 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.83□□□□□ -0.04
O00370 AC084346.2-201ENST00000607097 949 ntBASIC14.83□□□□□ -0.04
O00370 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.83□□□□□ -0.04
O00370 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 TEKT4P2-202ENST00000559466 1312 ntBASIC14.83□□□□□ -0.04
O00370 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.83□□□□□ -0.04
O00370 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 AC138761.6-201ENST00000583997 1423 ntBASIC14.83□□□□□ -0.04
O00370 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
O00370 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.83□□□□□ -0.04
O00370 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 AL445250.1-201ENST00000641671 2259 ntBASIC14.82□□□□□ -0.04
O00370 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
O00370 AC006372.4-201ENST00000624122 1543 ntBASIC14.82□□□□□ -0.04
O00370 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
O00370 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
O00370 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
O00370 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.82□□□□□ -0.04
O00370 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.82□□□□□ -0.04
O00370 AL627231.1-201ENST00000394467 1125 ntBASIC14.82□□□□□ -0.04
O00370 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
O00370 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.82□□□□□ -0.04
O00370 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms