Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SYNPO2Q9UMS6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 GBAP1-208ENST00000566701 1546 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 AC008038.1-201ENST00000634247 1314 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 AF274858.1-201ENST00000406288 372 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 HNRNPA3P12-201ENST00000437410 1063 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 AC025594.1-201ENST00000469533 543 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 PHBP18-201ENST00000546648 813 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 DNM1P51-201ENST00000558149 522 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 FAM90A12P-201ENST00000519497 2375 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 FAM90A24P-201ENST00000520792 2369 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 SRL-202ENST00000537996 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 AL009178.2-201ENST00000597278 2719 ntBASIC15.73■□□□□ 0.11
SYNPO2Q9UMS6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AP000437.1-201ENST00000624057 2085 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC008040.5-201ENST00000599781 1781 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC020931.1-201ENST00000589622 1346 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC011477.7-201ENST00000617163 1440 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC092570.1-201ENST00000414446 469 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC012158.2-201ENST00000536546 354 ntBASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPO2Q9UMS6 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms