Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC139749.1-202ENST00000617529 3139 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC103563.1-201ENST00000429316 123 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 FAM86JP-202ENST00000484500 988 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 NAT9-204ENST00000578822 839 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC091691.1-201ENST00000583587 1018 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 MEP1AP1-201ENST00000636082 1097 ntBASIC13.76□□□□□ -0.21
NCDNQ9UBB6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NCDNQ9UBB6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 KRT8P43-201ENST00000406052 1458 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 SIGLEC20P-201ENST00000595243 1311 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 GULOP-201ENST00000454030 748 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 RNU1-80P-201ENST00000459500 161 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC093700.1-201ENST00000503348 717 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC023051.2-201ENST00000541141 460 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 FAM187B2P-201ENST00000577135 713 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 KRT8P34-201ENST00000577607 1044 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 INTS4P1-203ENST00000641008 3683 ntBASIC13.75□□□□□ -0.21
NCDNQ9UBB6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NCDNQ9UBB6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCDNQ9UBB6 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms