Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AC125807.1-201ENST00000483097 614 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PGAM5P1-201ENST00000518923 814 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AP005019.2-201ENST00000615104 511 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AC138466.3-201ENST00000619983 221 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 AL354861.3-201ENST00000600140 2412 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 MARK2P16-201ENST00000605714 1723 ntBASIC11.4□□□□□ -0.58
SMIM3Q9BZL3 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.4□□□□□ -0.59
SMIM3Q9BZL3 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.39□□□□□ -0.59
SMIM3Q9BZL3 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms