Protein–RNA interactions for Protein: Q01082

SPTBN1, Spectrin beta chain, non-erythrocytic 1, humanhuman

Known RBP Predictions only

Length 2,364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1Q01082 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 CDKN2A-AS1-201ENST00000441769 823 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AC092903.1-201ENST00000466506 262 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AC100858.1-201ENST00000514059 1228 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AC015909.5-201ENST00000624336 2266 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 AL121753.2-201ENST00000624581 1461 ntBASIC12.24□□□□□ -0.45
SPTBN1Q01082 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SPTBN1Q01082 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPTBN1Q01082 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AGAP7P-201ENST00000582299 2062 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 AGAP14-201ENST00000624701 2060 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RPSAP6-201ENST00000417882 882 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 CA5BP1-205ENST00000435806 1064 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AC131235.2-201ENST00000445553 1057 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 RN7SL838P-201ENST00000481676 295 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 MYL6-215ENST00000549566 685 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AL359219.1-201ENST00000556311 934 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 FAM187B2P-201ENST00000577135 713 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 PHBP10-201ENST00000416467 784 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AC007881.1-201ENST00000437460 187 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RNA5SP420-201ENST00000516997 137 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 DERL2-206ENST00000572834 589 ntTSL 3 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 AC048382.6-201ENST00000621980 1223 ntBASIC12.23□□□□□ -0.45
SPTBN1Q01082 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC12.23□□□□□ -0.45
SPTBN1Q01082 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SPTBN1Q01082 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms