Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC118758.2-201ENST00000614242 2813 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC020763.3-201ENST00000625095 2904 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC008132.1-202ENST00000342005 1389 ntBASIC12.17□□□□□ -0.46
HIST1H3AP68431 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
HIST1H3AP68431 AC005562.1-201ENST00000583030 3219 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 AC073862.5-201ENST00000624129 2027 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 RCC2P5-201ENST00000492126 1487 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PDIA3P2-201ENST00000428073 158 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 RN7SL788P-201ENST00000460504 316 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 MIR4754-201ENST00000582477 89 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 AC020907.1-201ENST00000616460 1350 ntBASIC12.16□□□□□ -0.46
HIST1H3AP68431 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H3AP68431 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H3AP68431 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC024075.2-201ENST00000598112 1473 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 PES1P2-201ENST00000449745 1735 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 MIR769-201ENST00000390225 118 ntBASIC12.15□□□□□ -0.46
HIST1H3AP68431 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H3AP68431 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H3AP68431 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms