Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 AC138761.6-201ENST00000583997 1423 ntBASIC13.25□□□□□ -0.29
SKP1P63208 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 PYY2-201ENST00000315776 282 ntBASIC13.25□□□□□ -0.29
SKP1P63208 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 AP000356.3-201ENST00000382243 753 ntBASIC13.25□□□□□ -0.29
SKP1P63208 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
SKP1P63208 OR2W2P-201ENST00000406313 909 ntBASIC13.25□□□□□ -0.29
SKP1P63208 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.25□□□□□ -0.29
SKP1P63208 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.25□□□□□ -0.29
SKP1P63208 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 NOC2LP1-201ENST00000450578 752 ntBASIC13.25□□□□□ -0.29
SKP1P63208 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.25□□□□□ -0.29
SKP1P63208 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.25□□□□□ -0.29
SKP1P63208 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.25□□□□□ -0.29
SKP1P63208 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.25□□□□□ -0.29
SKP1P63208 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 MIR2392-201ENST00000584881 84 ntBASIC13.25□□□□□ -0.29
SKP1P63208 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 AC007718.1-201ENST00000621078 280 ntBASIC13.25□□□□□ -0.29
SKP1P63208 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SKP1P63208 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.25□□□□□ -0.29
SKP1P63208 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.25□□□□□ -0.29
SKP1P63208 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SKP1P63208 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 AL358781.1-202ENST00000321081 1360 ntBASIC13.24□□□□□ -0.29
SKP1P63208 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.24□□□□□ -0.29
SKP1P63208 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.24□□□□□ -0.29
SKP1P63208 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.24□□□□□ -0.29
SKP1P63208 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.24□□□□□ -0.29
SKP1P63208 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.24□□□□□ -0.29
SKP1P63208 SNORD3B-1-201ENST00000577988 758 ntBASIC13.24□□□□□ -0.29
SKP1P63208 MIR4522-201ENST00000584932 87 ntBASIC13.24□□□□□ -0.29
SKP1P63208 AL133499.1-201ENST00000596207 608 ntBASIC13.24□□□□□ -0.29
SKP1P63208 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 HPX-213ENST00000615166 826 ntTSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.24□□□□□ -0.29
SKP1P63208 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SKP1P63208 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SKP1P63208 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.24□□□□□ -0.29
SKP1P63208 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms