Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
VBP1P61758 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 AC134915.1-201ENST00000426461 574 ntBASIC12.49□□□□□ -0.41
VBP1P61758 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 AC023141.5-201ENST00000458585 616 ntBASIC12.49□□□□□ -0.41
VBP1P61758 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.49□□□□□ -0.41
VBP1P61758 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 AP005019.2-201ENST00000615104 511 ntBASIC12.49□□□□□ -0.41
VBP1P61758 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.49□□□□□ -0.41
VBP1P61758 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VBP1P61758 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VBP1P61758 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.49□□□□□ -0.41
VBP1P61758 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.49□□□□□ -0.41
VBP1P61758 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
VBP1P61758 AC080013.1-204ENST00000607426 2185 ntBASIC12.49□□□□□ -0.41
VBP1P61758 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VBP1P61758 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 AL357054.4-201ENST00000606285 2814 ntBASIC12.48□□□□□ -0.41
VBP1P61758 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 AC007952.5-201ENST00000572818 1486 ntBASIC12.48□□□□□ -0.41
VBP1P61758 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.48□□□□□ -0.41
VBP1P61758 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.48□□□□□ -0.41
VBP1P61758 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.48□□□□□ -0.41
VBP1P61758 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.48□□□□□ -0.41
VBP1P61758 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 SRD5A3P1-201ENST00000603021 949 ntBASIC12.48□□□□□ -0.41
VBP1P61758 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VBP1P61758 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.48□□□□□ -0.41
VBP1P61758 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VBP1P61758 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
VBP1P61758 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VBP1P61758 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms