Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SEC61A1P61619 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 BCYRN1-201ENST00000418539 200 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 SERPINA13P-202ENST00000478994 924 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.3□□□□□ -0.44
SEC61A1P61619 AC091804.1-201ENST00000486888 567 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.3□□□□□ -0.44
SEC61A1P61619 GCOM2-201ENST00000509133 1104 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.3□□□□□ -0.44
SEC61A1P61619 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 ACTG1P17-201ENST00000558391 1119 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 AC100827.2-201ENST00000563214 1194 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 DUX4L46-201ENST00000566845 751 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.3□□□□□ -0.44
SEC61A1P61619 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 TRIM80P-201ENST00000455685 2848 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SEC61A1P61619 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.3□□□□□ -0.44
SEC61A1P61619 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.3□□□□□ -0.44
SEC61A1P61619 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 KRT8P29-201ENST00000420409 1371 ntBASIC12.3□□□□□ -0.44
SEC61A1P61619 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEC61A1P61619 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 FNTAP2-201ENST00000430308 634 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.29□□□□□ -0.44
SEC61A1P61619 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.29□□□□□ -0.44
SEC61A1P61619 KLF2P1-201ENST00000447438 1042 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 HIST2H2BC-201ENST00000498492 580 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.29□□□□□ -0.44
SEC61A1P61619 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.29□□□□□ -0.44
SEC61A1P61619 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.29□□□□□ -0.44
SEC61A1P61619 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.29□□□□□ -0.44
SEC61A1P61619 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 AC020914.3-201ENST00000594712 304 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 AC132192.2-201ENST00000596206 1147 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 AC022748.3-201ENST00000621828 275 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 AC244452.3-201ENST00000636814 210 ntBASIC12.29□□□□□ -0.44
SEC61A1P61619 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.29□□□□□ -0.44
SEC61A1P61619 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEC61A1P61619 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SEC61A1P61619 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms