Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 SPTLC1P3-201ENST00000403408 259 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 CNN2P1-201ENST00000453616 918 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 KRT18P37-201ENST00000520711 1282 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 ALG10-202ENST00000538927 571 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 KRT8P1-201ENST00000557533 1207 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 MIR4309-201ENST00000582498 83 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 IFNL3P1-201ENST00000595082 501 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 EMP3-204ENST00000596315 761 ntTSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 AC138696.2-201ENST00000607376 223 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 AL022334.2-201ENST00000610000 484 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 AC106782.5-201ENST00000616011 337 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 AC009145.4-201ENST00000625119 1294 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 AC007952.5-201ENST00000572818 1486 ntBASIC11.67□□□□□ -0.54
RIPPLY3P57055 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.67□□□□□ -0.54
RIPPLY3P57055 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RIPPLY3P57055 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC074019.1-201ENST00000428788 1096 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 FDPSP7-201ENST00000429043 1054 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC025594.1-201ENST00000469533 543 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 RN7SL523P-201ENST00000484401 298 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC099328.1-201ENST00000498809 1030 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 OR52V1P-201ENST00000515557 898 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC087203.1-201ENST00000532111 1181 ntBASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC11.66□□□□□ -0.54
RIPPLY3P57055 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RIPPLY3P57055 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms