Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.31□□□□□ -0.44
CCR9P51686 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CCR9P51686 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
CCR9P51686 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.31□□□□□ -0.44
CCR9P51686 AC104758.3-203ENST00000562938 2123 ntBASIC12.31□□□□□ -0.44
CCR9P51686 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CCR9P51686 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 DNM1P41-201ENST00000623634 3350 ntBASIC12.3□□□□□ -0.44
CCR9P51686 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCR9P51686 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CCR9P51686 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.3□□□□□ -0.44
CCR9P51686 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCR9P51686 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.3□□□□□ -0.44
CCR9P51686 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.3□□□□□ -0.44
CCR9P51686 AC011742.3-201ENST00000439053 820 ntBASIC12.3□□□□□ -0.44
CCR9P51686 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.3□□□□□ -0.44
CCR9P51686 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.3□□□□□ -0.44
CCR9P51686 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.3□□□□□ -0.44
CCR9P51686 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.3□□□□□ -0.44
CCR9P51686 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.3□□□□□ -0.44
CCR9P51686 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.3□□□□□ -0.44
CCR9P51686 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCR9P51686 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.3□□□□□ -0.44
CCR9P51686 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.3□□□□□ -0.44
CCR9P51686 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCR9P51686 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCR9P51686 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.29□□□□□ -0.44
CCR9P51686 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.29□□□□□ -0.44
CCR9P51686 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.29□□□□□ -0.44
CCR9P51686 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.29□□□□□ -0.44
CCR9P51686 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.29□□□□□ -0.44
CCR9P51686 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.29□□□□□ -0.44
CCR9P51686 TUBB8P8-201ENST00000458717 1058 ntBASIC12.29□□□□□ -0.44
CCR9P51686 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 AL596325.1-201ENST00000563991 1082 ntBASIC12.29□□□□□ -0.44
CCR9P51686 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 AL356740.1-201ENST00000602192 1297 ntBASIC12.29□□□□□ -0.44
CCR9P51686 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCR9P51686 AP001972.5-201ENST00000624624 2338 ntBASIC12.29□□□□□ -0.44
CCR9P51686 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCR9P51686 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms