Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
KNTC1P50748 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.18□□□□□ -0.3
KNTC1P50748 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KNTC1P50748 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC13.18□□□□□ -0.3
KNTC1P50748 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.18□□□□□ -0.3
KNTC1P50748 ISL1-203ENST00000511384 981 ntTSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 BAK1P2-201ENST00000532665 631 ntBASIC13.18□□□□□ -0.3
KNTC1P50748 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.18□□□□□ -0.3
KNTC1P50748 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KNTC1P50748 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 AL139158.3-201ENST00000641212 1562 ntBASIC13.18□□□□□ -0.3
KNTC1P50748 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 AC068760.1-201ENST00000493579 1953 ntBASIC13.18□□□□□ -0.3
KNTC1P50748 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 PES1P2-201ENST00000449745 1735 ntBASIC13.18□□□□□ -0.3
KNTC1P50748 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.18□□□□□ -0.3
KNTC1P50748 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KNTC1P50748 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
KNTC1P50748 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 RPSAP6-201ENST00000417882 882 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 AHCYP3-201ENST00000420053 1279 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.17□□□□□ -0.3
KNTC1P50748 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC13.17□□□□□ -0.3
KNTC1P50748 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.17□□□□□ -0.3
KNTC1P50748 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 MIR4326-201ENST00000582203 59 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
KNTC1P50748 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 AL031595.1-201ENST00000623969 4709 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 PXK-210ENST00000479241 2817 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
KNTC1P50748 Z98885.3-201ENST00000624882 1757 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
KNTC1P50748 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 MPV17-209ENST00000405983 859 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 MAGEA7P-201ENST00000436482 942 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 AC092910.2-201ENST00000491262 348 ntBASIC13.17□□□□□ -0.3
KNTC1P50748 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.17□□□□□ -0.3
KNTC1P50748 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.17□□□□□ -0.3
KNTC1P50748 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
KNTC1P50748 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.16□□□□□ -0.3
KNTC1P50748 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNTC1P50748 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.16□□□□□ -0.3
KNTC1P50748 AC022532.1-201ENST00000624563 1728 ntBASIC13.16□□□□□ -0.3
KNTC1P50748 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KNTC1P50748 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.16□□□□□ -0.3
KNTC1P50748 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.16□□□□□ -0.3
KNTC1P50748 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.16□□□□□ -0.3
KNTC1P50748 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.16□□□□□ -0.3
KNTC1P50748 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.16□□□□□ -0.3
KNTC1P50748 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms