Protein–RNA interactions for Protein: P49221

TGM4, Protein-glutamine gamma-glutamyltransferase 4, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGM4P49221 AC073413.1-201ENST00000603927 732 ntBASIC12.56□□□□□ -0.4
TGM4P49221 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.56□□□□□ -0.4
TGM4P49221 SNORA50.1-201ENST00000628590 135 ntBASIC12.56□□□□□ -0.4
TGM4P49221 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 CCT8L1P-201ENST00000465400 1674 ntBASIC12.56□□□□□ -0.4
TGM4P49221 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.56□□□□□ -0.4
TGM4P49221 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TGM4P49221 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 SHC1P1-201ENST00000425230 1745 ntBASIC12.56□□□□□ -0.4
TGM4P49221 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 SHMT1P1-201ENST00000419974 1312 ntBASIC12.56□□□□□ -0.4
TGM4P49221 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TGM4P49221 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.56□□□□□ -0.4
TGM4P49221 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TGM4P49221 AL358781.1-202ENST00000321081 1360 ntBASIC12.56□□□□□ -0.4
TGM4P49221 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 AC002350.2-201ENST00000623894 1828 ntBASIC12.55□□□□□ -0.4
TGM4P49221 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.55□□□□□ -0.4
TGM4P49221 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 AC112492.5-201ENST00000421897 457 ntBASIC12.55□□□□□ -0.4
TGM4P49221 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
TGM4P49221 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.55□□□□□ -0.4
TGM4P49221 COX5BP1-201ENST00000507622 393 ntBASIC12.55□□□□□ -0.4
TGM4P49221 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.55□□□□□ -0.4
TGM4P49221 AP000812.2-201ENST00000538934 718 ntBASIC12.55□□□□□ -0.4
TGM4P49221 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.55□□□□□ -0.4
TGM4P49221 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 AC239800.4-201ENST00000603712 296 ntBASIC12.55□□□□□ -0.4
TGM4P49221 AL512343.1-201ENST00000605837 169 ntBASIC12.55□□□□□ -0.4
TGM4P49221 AC244669.2-201ENST00000612320 853 ntBASIC12.55□□□□□ -0.4
TGM4P49221 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 AC090386.2-201ENST00000623010 1039 ntBASIC12.55□□□□□ -0.4
TGM4P49221 DNM1P41-201ENST00000623634 3350 ntBASIC12.55□□□□□ -0.4
TGM4P49221 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 AL008718.2-201ENST00000609206 1313 ntBASIC12.55□□□□□ -0.4
TGM4P49221 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
TGM4P49221 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.55□□□□□ -0.4
TGM4P49221 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TGM4P49221 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TGM4P49221 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TGM4P49221 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TGM4P49221 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms