Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.57□□□□□ -0.08
SLC1A1P43005 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.57□□□□□ -0.08
SLC1A1P43005 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 AC060814.4-201ENST00000594169 2163 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.57□□□□□ -0.08
SLC1A1P43005 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SLC1A1P43005 RCC2P5-201ENST00000492126 1487 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 PCDHB18P-202ENST00000526308 3197 ntBASIC14.57□□□□□ -0.08
SLC1A1P43005 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 TBC1D27-202ENST00000424239 1573 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SLC1A1P43005 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 AC040160.2-201ENST00000623816 1675 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 OR8S1-201ENST00000310194 1080 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 LINC00265-2P-201ENST00000413372 782 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 PPP1R2P4-201ENST00000424051 595 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC1A1P43005 AC005722.1-201ENST00000431878 964 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC1A1P43005 AC104306.2-201ENST00000451877 341 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 COQ10BP2-201ENST00000513804 724 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.56□□□□□ -0.08
SLC1A1P43005 AL133467.4-201ENST00000602953 725 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SLC1A1P43005 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 FRMPD2B-201ENST00000431305 1347 ntBASIC14.56□□□□□ -0.08
SLC1A1P43005 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.56□□□□□ -0.08
SLC1A1P43005 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SLC1A1P43005 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SLC1A1P43005 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A1P43005 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.55□□□□□ -0.08
SLC1A1P43005 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SLC1A1P43005 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.55□□□□□ -0.08
SLC1A1P43005 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC1A1P43005 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SLC1A1P43005 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SLC1A1P43005 AC132825.4-202ENST00000578792 434 ntBASIC14.55□□□□□ -0.08
SLC1A1P43005 AC026740.1-201ENST00000607068 791 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms