Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 AC004899.2-201ENST00000622993 3860 ntBASIC12.48□□□□□ -0.41
CNOT4O95628 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.48□□□□□ -0.41
CNOT4O95628 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 RPL18AP8-201ENST00000486071 528 ntBASIC12.48□□□□□ -0.41
CNOT4O95628 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.48□□□□□ -0.41
CNOT4O95628 ALG1L13P-202ENST00000519320 584 ntBASIC12.48□□□□□ -0.41
CNOT4O95628 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.48□□□□□ -0.41
CNOT4O95628 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.48□□□□□ -0.41
CNOT4O95628 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 AC005632.3-201ENST00000605544 308 ntBASIC12.48□□□□□ -0.41
CNOT4O95628 AP001065.2-201ENST00000617205 644 ntBASIC12.48□□□□□ -0.41
CNOT4O95628 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CNOT4O95628 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.48□□□□□ -0.41
CNOT4O95628 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
CNOT4O95628 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CNOT4O95628 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CNOT4O95628 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.47□□□□□ -0.41
CNOT4O95628 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CNOT4O95628 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CAP2P1-201ENST00000557743 1390 ntBASIC12.47□□□□□ -0.41
CNOT4O95628 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CNOT4O95628 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CNOT4O95628 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.47□□□□□ -0.41
CNOT4O95628 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 RPL7P35-201ENST00000446943 740 ntBASIC12.47□□□□□ -0.41
CNOT4O95628 AC018638.5-201ENST00000450885 754 ntBASIC12.47□□□□□ -0.41
CNOT4O95628 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.47□□□□□ -0.41
CNOT4O95628 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.47□□□□□ -0.41
CNOT4O95628 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CNOT4O95628 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CNOT4O95628 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CNOT4O95628 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms