Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 AC126177.1-201ENST00000547829 2218 ntBASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RIMBP3Q9UFD9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.77■□□□□ 0.91
RIMBP3Q9UFD9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIMBP3Q9UFD9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RIMBP3Q9UFD9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 MARK2P9-201ENST00000430958 1727 ntBASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 B9D1-204ENST00000395616 733 ntTSL 3 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 MIR4695-201ENST00000577305 74 ntBASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 SIGLEC21P-201ENST00000598990 1010 ntBASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 AL807752.1-201ENST00000395082 1322 ntBASIC20.76■□□□□ 0.91
RIMBP3Q9UFD9 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 TRAV38-2DV8-201ENST00000390465 395 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 UQCRFS1P2-201ENST00000426701 722 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AC074351.1-201ENST00000439413 481 ntTSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 INO80C-203ENST00000441607 904 ntTSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 SSPN-207ENST00000540266 587 ntTSL 4 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 HCK-211ENST00000639405 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AL118505.1-201ENST00000619370 1932 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 IL36A-201ENST00000259211 888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AL663070.1-201ENST00000438210 725 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 RN7SL150P-201ENST00000462298 262 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AC069181.1-201ENST00000498256 554 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 AC112236.2-201ENST00000608402 845 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 BAP1-211ENST00000615113 489 ntBASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 KRTAP4-9-202ENST00000617453 558 ntTSL 5 BASIC20.75■□□□□ 0.91
RIMBP3Q9UFD9 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 AC100774.1-201ENST00000565581 1603 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 NUDT7-201ENST00000268533 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 HLA-U-204ENST00000418981 186 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 KRTAP9-10P-201ENST00000435672 207 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 HUNK-AS1-201ENST00000437109 616 ntTSL 3 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 AC098934.2-202ENST00000438944 1033 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 AL772155.2-201ENST00000443910 472 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 AL109618.3-201ENST00000622748 430 ntBASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 SPATA22-204ENST00000541913 1683 ntTSL 2 BASIC20.74■□□□□ 0.91
RIMBP3Q9UFD9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms