Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRMT13Q9NUP7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TREX1-203ENST00000456089 629 ntTSL 3 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 RPL29P2-202ENST00000498671 657 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 RNA5SP420-201ENST00000516997 137 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC004923.3-201ENST00000527532 355 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC010202.1-201ENST00000551181 405 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC132812.1-201ENST00000583145 892 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 FMO6P-201ENST00000236166 1620 ntBASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRMT13Q9NUP7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 FDPSP7-201ENST00000429043 1054 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 AL773545.2-201ENST00000442149 472 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 ALG1L15P-201ENST00000482834 794 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 RPL29P2-201ENST00000488409 460 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 AC137723.2-201ENST00000623540 398 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 AL357143.1-203ENST00000639750 881 ntBASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.09■□□□□ 0.01
TRMT13Q9NUP7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 332.8 ms