Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC125604.1-201ENST00000496255 707 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC116345.2-201ENST00000512837 523 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AL451050.2-201ENST00000606967 682 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AL021578.1-201ENST00000613646 709 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 AL161773.1-201ENST00000624845 863 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 MSNP1-201ENST00000511640 1732 ntBASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UPF3BQ9BZI7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 MIR3188-201ENST00000583494 85 ntBASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 ZNF493-208ENST00000599461 1769 ntBASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 MKRN5P-201ENST00000445263 1467 ntBASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.66■□□□□ 0.26
UPF3BQ9BZI7 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 AC020763.3-201ENST00000625095 2904 ntBASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 AC015909.3-201ENST00000572855 1794 ntBASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms