Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 CICP16-201ENST00000502609 2813 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AC020763.4-201ENST00000623414 4170 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 RBM14-203ENST00000409372 876 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AC098591.1-202ENST00000507914 937 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 MT1G-204ENST00000569500 305 ntTSL 3 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 MAS1LP1-206ENST00000419416 1047 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 C2orf27AP2-201ENST00000438438 555 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ELOBP2-201ENST00000526184 355 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AL353997.3-201ENST00000586597 589 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AC105105.4-201ENST00000610389 713 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AC010776.3-201ENST00000617349 424 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 UBR1-212ENST00000627960 189 ntTSL 5 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AC041040.2-201ENST00000622926 2899 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 SLC9A7P1-201ENST00000554295 3311 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AL357054.1-201ENST00000407035 1227 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 AL009178.2-201ENST00000597278 2719 ntBASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ALMS1Q8TCU4 GOLGA8EP-201ENST00000530246 1959 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 IGHV3-6-201ENST00000518407 347 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 AC027601.5-201ENST00000624065 2482 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 AC026748.1-201ENST00000624349 3251 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 AC140479.7-201ENST00000636301 2332 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 TSACC-206ENST00000466306 477 ntTSL 3 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ASS1P9-201ENST00000513426 1236 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 HNRNPA1P69-201ENST00000552536 933 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 AC013472.3-201ENST00000607407 659 ntBASIC8.92□□□□□ -0.98
ALMS1Q8TCU4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms