Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 INTS4P1-203ENST00000641008 3683 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC067942.2-201ENST00000506227 1268 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 IGHV3-6-201ENST00000518407 347 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 PMM2-216ENST00000569958 698 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC073592.10-201ENST00000624789 597 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TCAM1P-207ENST00000485295 1537 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 TFAM-201ENST00000373895 973 ntTSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AL133517.1-201ENST00000413412 748 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC010395.2-201ENST00000509899 904 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 snoZ6.3-201ENST00000583496 76 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC099795.2-201ENST00000639582 440 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC023794.5-201ENST00000564380 2157 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 MBL3P-201ENST00000402234 644 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 RN7SL677P-201ENST00000466970 319 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AP003170.2-201ENST00000544730 786 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AL138762.1-201ENST00000608554 1637 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 AC244154.1-201ENST00000620148 1555 ntBASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
VPS13DQ5THJ4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 AC004884.1-201ENST00000393647 319 ntBASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 AC112694.1-202ENST00000540985 943 ntBASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 DNM1P50-201ENST00000565767 508 ntBASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 AC087893.1-201ENST00000612818 664 ntBASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
VPS13DQ5THJ4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 DTX2P1-201ENST00000425797 1633 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AL359845.1-201ENST00000458202 1648 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 FTLP3-201ENST00000427242 528 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC126471.1-201ENST00000550676 362 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AL109983.1-201ENST00000603234 646 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC117500.5-201ENST00000623233 527 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC005154.3-201ENST00000419639 1393 ntBASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC8.89□□□□□ -0.99
VPS13DQ5THJ4 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms