Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
GFRA1P56159 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 AC020917.4-201ENST00000623994 1999 ntBASIC12.42□□□□□ -0.42
GFRA1P56159 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 LINC00634-202ENST00000505157 222 ntBASIC12.42□□□□□ -0.42
GFRA1P56159 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.42□□□□□ -0.42
GFRA1P56159 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.42□□□□□ -0.42
GFRA1P56159 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.42□□□□□ -0.42
GFRA1P56159 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.42□□□□□ -0.42
GFRA1P56159 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.42□□□□□ -0.42
GFRA1P56159 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.42□□□□□ -0.42
GFRA1P56159 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 AC067750.1-201ENST00000608826 6545 ntBASIC12.42□□□□□ -0.42
GFRA1P56159 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 FUCA1P1-201ENST00000374476 1351 ntBASIC12.42□□□□□ -0.42
GFRA1P56159 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.42□□□□□ -0.42
GFRA1P56159 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
GFRA1P56159 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
GFRA1P56159 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.41□□□□□ -0.42
GFRA1P56159 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
GFRA1P56159 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.41□□□□□ -0.42
GFRA1P56159 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 PIN4P1-201ENST00000451079 396 ntBASIC12.41□□□□□ -0.42
GFRA1P56159 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.41□□□□□ -0.42
GFRA1P56159 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.41□□□□□ -0.42
GFRA1P56159 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.41□□□□□ -0.42
GFRA1P56159 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms