Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC140878.1-201ENST00000565277 250 ntBASIC14□□□□□ -0.17
MDH1P40925 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14□□□□□ -0.17
MDH1P40925 AC008738.7-201ENST00000609744 511 ntBASIC14□□□□□ -0.17
MDH1P40925 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14□□□□□ -0.17
MDH1P40925 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14□□□□□ -0.17
MDH1P40925 AC090386.2-201ENST00000623010 1039 ntBASIC14□□□□□ -0.17
MDH1P40925 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC14□□□□□ -0.17
MDH1P40925 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14□□□□□ -0.17
MDH1P40925 AC080013.1-204ENST00000607426 2185 ntBASIC14□□□□□ -0.17
MDH1P40925 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
MDH1P40925 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC14□□□□□ -0.17
MDH1P40925 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 AC009108.4-201ENST00000623284 2451 ntBASIC14□□□□□ -0.17
MDH1P40925 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AC005696.4-201ENST00000614400 3147 ntBASIC13.99□□□□□ -0.17
MDH1P40925 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.99□□□□□ -0.17
MDH1P40925 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AL162615.1-201ENST00000429893 1653 ntBASIC13.99□□□□□ -0.17
MDH1P40925 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
MDH1P40925 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 CNN2P2-201ENST00000443536 909 ntBASIC13.99□□□□□ -0.17
MDH1P40925 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.99□□□□□ -0.17
MDH1P40925 CNN2P3-201ENST00000450201 906 ntBASIC13.99□□□□□ -0.17
MDH1P40925 KLF2P3-201ENST00000451977 1087 ntBASIC13.99□□□□□ -0.17
MDH1P40925 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.99□□□□□ -0.17
MDH1P40925 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 AC112482.1-201ENST00000492080 688 ntBASIC13.99□□□□□ -0.17
MDH1P40925 AC097493.3-201ENST00000509725 367 ntBASIC13.99□□□□□ -0.17
MDH1P40925 AC104596.2-201ENST00000512793 793 ntBASIC13.99□□□□□ -0.17
MDH1P40925 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.99□□□□□ -0.17
MDH1P40925 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.99□□□□□ -0.17
MDH1P40925 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.99□□□□□ -0.17
MDH1P40925 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AL356740.1-201ENST00000602192 1297 ntBASIC13.99□□□□□ -0.17
MDH1P40925 AL136317.3-201ENST00000618497 906 ntBASIC13.99□□□□□ -0.17
MDH1P40925 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
MDH1P40925 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MDH1P40925 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.99□□□□□ -0.17
MDH1P40925 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MDH1P40925 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 AL805961.2-201ENST00000642139 4817 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms