Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.24□□□□□ -0.13
FDFT1P37268 AC010970.1-201ENST00000445125 1848 ntBASIC14.24□□□□□ -0.13
FDFT1P37268 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.24□□□□□ -0.13
FDFT1P37268 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FDFT1P37268 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.24□□□□□ -0.13
FDFT1P37268 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FDFT1P37268 CES1P1-201ENST00000421606 1704 ntBASIC14.24□□□□□ -0.13
FDFT1P37268 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FDFT1P37268 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FDFT1P37268 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.24□□□□□ -0.13
FDFT1P37268 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.23□□□□□ -0.13
FDFT1P37268 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.23□□□□□ -0.13
FDFT1P37268 PFN1P12-201ENST00000455938 534 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.23□□□□□ -0.13
FDFT1P37268 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.23□□□□□ -0.13
FDFT1P37268 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.23□□□□□ -0.13
FDFT1P37268 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.23□□□□□ -0.13
FDFT1P37268 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 AL021707.6-201ENST00000609212 491 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.23□□□□□ -0.13
FDFT1P37268 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.23□□□□□ -0.13
FDFT1P37268 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 KRT8P43-201ENST00000406052 1458 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 AC020763.3-201ENST00000625095 2904 ntBASIC14.23□□□□□ -0.13
FDFT1P37268 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FDFT1P37268 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FDFT1P37268 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.22□□□□□ -0.13
FDFT1P37268 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 AC002350.2-201ENST00000623894 1828 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 FRMPD2B-201ENST00000431305 1347 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 KRT17P5-201ENST00000332088 839 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 AC239868.1-201ENST00000369385 493 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 BRWD1P1-201ENST00000401091 371 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.22□□□□□ -0.13
FDFT1P37268 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.22□□□□□ -0.13
FDFT1P37268 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 NDUFB10P1-201ENST00000567319 521 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.22□□□□□ -0.13
FDFT1P37268 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FDFT1P37268 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.22□□□□□ -0.13
FDFT1P37268 AC026740.1-201ENST00000607068 791 ntBASIC14.22□□□□□ -0.13
FDFT1P37268 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms