Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 AL358781.1-202ENST00000321081 1360 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.82□□□□□ -0.68
CXCL1P09341 AC211486.1-202ENST00000416371 468 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 AC107890.1-201ENST00000422478 521 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 MEP1AP4-201ENST00000423244 1087 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 CNN2P11-201ENST00000429351 262 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 AP006288.1-201ENST00000446065 395 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 AC009477.1-201ENST00000452936 217 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 RN7SL399P-201ENST00000471648 279 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 AC211476.1-201ENST00000503899 468 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.82□□□□□ -0.68
CXCL1P09341 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.82□□□□□ -0.68
CXCL1P09341 AC120045.2-201ENST00000567334 178 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.82□□□□□ -0.68
CXCL1P09341 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.82□□□□□ -0.68
CXCL1P09341 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 LINC00563-201ENST00000566370 1400 ntBASIC10.82□□□□□ -0.68
CXCL1P09341 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CXCL1P09341 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.82□□□□□ -0.68
CXCL1P09341 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 BX537318.2-201ENST00000624893 4162 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 FAM90A17P-201ENST00000533716 1957 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 AC020917.4-201ENST00000623994 1999 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL1P09341 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CXCL1P09341 INTS4P2-202ENST00000614726 2019 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 MED24-201ENST00000356271 3446 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 RNU1-114P-201ENST00000365297 166 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL1P09341 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 EIF3FP3-201ENST00000434851 1086 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL1P09341 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.81□□□□□ -0.68
CXCL1P09341 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 AC138761.1-201ENST00000584393 385 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 BX088702.1-201ENST00000610784 235 ntBASIC10.81□□□□□ -0.68
CXCL1P09341 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL1P09341 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL1P09341 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL1P09341 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms