Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.94□□□□□ -0.5
SDCBPO00560 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SDCBPO00560 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SDCBPO00560 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
SDCBPO00560 SALL4P6-201ENST00000429385 1691 ntBASIC11.94□□□□□ -0.5
SDCBPO00560 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SDCBPO00560 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SDCBPO00560 AC027369.3-201ENST00000530465 3707 ntBASIC11.94□□□□□ -0.5
SDCBPO00560 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 AC063926.2-201ENST00000623766 1308 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SDCBPO00560 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.93□□□□□ -0.5
SDCBPO00560 AL157407.1-201ENST00000435784 904 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 U91328.1-201ENST00000437528 223 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 ACA64.2-201ENST00000459014 129 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 AC009955.4-201ENST00000597192 544 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SDCBPO00560 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 RCC2P1-201ENST00000452257 1476 ntBASIC11.93□□□□□ -0.5
SDCBPO00560 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.93□□□□□ -0.5
SDCBPO00560 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SDCBPO00560 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SDCBPO00560 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.92□□□□□ -0.5
SDCBPO00560 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.92□□□□□ -0.5
SDCBPO00560 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.92□□□□□ -0.5
SDCBPO00560 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 ANKRD19P-201ENST00000338192 862 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SDCBPO00560 HLA-V-201ENST00000429037 534 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 FAM58BP-201ENST00000439056 645 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 CSF2RBP1-201ENST00000447905 391 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SDCBPO00560 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 SNX29P1-201ENST00000548357 1007 ntBASIC11.92□□□□□ -0.5
SDCBPO00560 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.92□□□□□ -0.5
SDCBPO00560 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms