Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 FLJ30679-201ENST00000624773 1980 ntBASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 AL357140.3-201ENST00000639753 1983 ntBASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 AC010536.1-201ENST00000538868 2611 ntBASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 AC073335.2-201ENST00000610177 3441 ntBASIC11.05□□□□□ -0.64
MAP1LC3B2A6NCE7 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC145098.2-201ENST00000623593 3026 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC100757.3-201ENST00000622361 1406 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 Z98885.3-201ENST00000624882 1757 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 TREML5P-201ENST00000421694 576 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 DNAJB3-201ENST00000446806 729 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC093433.1-201ENST00000458048 571 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC007952.5-201ENST00000572818 1486 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 AC099521.2-201ENST00000619354 2036 ntBASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
MAP1LC3B2A6NCE7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms