Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
UBE2D4Q9Y2X8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC006001.1-201ENST00000325130 474 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 MIR1202-201ENST00000408529 83 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 PARVG-202ENST00000415224 999 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AP006294.1-201ENST00000415407 339 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC092580.1-201ENST00000433998 658 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC003958.1-201ENST00000435883 421 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CYMP-203ENST00000474680 1263 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 SLC25A47P1-201ENST00000531577 414 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 KRT90P-201ENST00000549264 1064 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC015936.2-201ENST00000593177 259 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC244669.2-201ENST00000612320 853 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 Z98259.2-201ENST00000641583 609 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AHCYP4-201ENST00000419201 1315 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 AC008040.5-201ENST00000599781 1781 ntBASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBE2D4Q9Y2X8 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 CSPG4P11-201ENST00000560634 4910 ntBASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBE2D4Q9Y2X8 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms