Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AC111170.3-201ENST00000624282 2464 ntBASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 AC063926.3-201ENST00000624734 5658 ntBASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 NCLP1-201ENST00000445357 1963 ntBASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 IGHVII-33-1-201ENST00000524010 280 ntBASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 AC078814.4-201ENST00000546650 327 ntBASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.77■□□□□ 0.12
SYNPO2Q9UMS6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 AC108024.1-201ENST00000626286 1721 ntBASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SYNPO2Q9UMS6 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 BEND3P1-201ENST00000421591 1944 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 PTGER4P2-201ENST00000328411 252 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 SNORD23-201ENST00000408876 110 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AC133141.1-201ENST00000443015 339 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 PTGER4P3-201ENST00000458150 252 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 SLC25A51P3-201ENST00000521814 889 ntBASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
SYNPO2Q9UMS6 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms