Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AC073869.2-201ENST00000417338 1026 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 DUTP3-201ENST00000450025 415 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 IGHJ2P-201ENST00000454480 60 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RN7SL720P-201ENST00000488178 304 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ALG1L13P-202ENST00000519320 584 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RTN3P1-201ENST00000536295 711 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 KRT18P8-201ENST00000581937 1246 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 MIR4754-201ENST00000582477 89 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 MARK2P16-201ENST00000605714 1723 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
PARPBPQ9NWS1 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CICP16-201ENST00000502609 2813 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 KRT8P31-201ENST00000504812 1408 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 AK2P2-201ENST00000439142 405 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 AC242376.1-201ENST00000559033 726 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 AL109837.1-201ENST00000603272 613 ntBASIC12.57□□□□□ -0.4
PARPBPQ9NWS1 CR392039.2-201ENST00000623182 509 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms