Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 KLF2P1-201ENST00000447438 1042 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 SPTLC1P5-201ENST00000450718 252 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 IGHJ2P-201ENST00000454480 60 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC245884.6-201ENST00000515672 1067 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC024681.1-201ENST00000521917 487 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC027237.1-201ENST00000560942 655 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 MIR6074-201ENST00000612054 107 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 KRT8P28-201ENST00000433288 1390 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 MTCO1P8-201ENST00000416914 1523 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AL022393.1-201ENST00000625142 1677 ntBASIC12.77□□□□□ -0.37
USB1Q9BQ65 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 KHSRPP1-201ENST00000427983 1768 ntBASIC12.76□□□□□ -0.37
USB1Q9BQ65 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.76□□□□□ -0.37
USB1Q9BQ65 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 OR2X1P-201ENST00000421144 687 ntBASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC12.76□□□□□ -0.37
USB1Q9BQ65 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AC007342.9-201ENST00000623877 1385 ntBASIC12.76□□□□□ -0.37
USB1Q9BQ65 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
USB1Q9BQ65 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.76□□□□□ -0.37
USB1Q9BQ65 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms