Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 Z98885.3-201ENST00000624882 1757 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AL136309.1-201ENST00000403917 691 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC010141.1-201ENST00000411585 623 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 SSR4P1-201ENST00000415143 412 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC124068.2-201ENST00000569473 1109 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC027307.3-201ENST00000594262 1100 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SHC1P1-201ENST00000425230 1745 ntBASIC11.37□□□□□ -0.59
RAB40CQ96S21 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RAB40CQ96S21 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB40CQ96S21 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AL008718.2-201ENST00000609206 1313 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DGCR5-201ENST00000399539 862 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 CRB3P1-201ENST00000449338 276 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 GOLGA2P8-201ENST00000505201 779 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AC022217.1-201ENST00000521069 738 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 PTP4A1P2-201ENST00000546033 454 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 RBM8B-201ENST00000555532 525 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AL358472.3-201ENST00000608147 415 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms